Save File/Progress Issue

I completed the first two Chaos Theory challenges (JP and JP: San Diego), but after loading my game it says that Jurassic Park San Diego hasn't even been started, and Jurassic Park is at like 76%. Despite this, my most recent save (as in the option for "Continue") is the save right after I completed Jurassic Park: San Diego. What can I do to fix this?
 
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