The problem you have is that the controlling faction CONTRAIL also went into civil war, and I think that confused the bgs somewhat. 2 wars should not have been going at once and when our war started the 2 factions in our war seem to have taken over the CZ's. What I understand should of happened is the first war between transport holdings, vs peoples Anlave should have finished first before the contrail one started, but this didn't happen.
Both wars are now over.