You have to drop out at the capital ship - select it on your navigation list.
Michael
When I visited Sol (prior to the Sorbago conflict and my subsequent relocation to Imperial Space) I stopped by to check it out. Dropped into the Capital Ship nav point, but the Capital Ship did not spawn. There were no contacts on my nav panel either.
I had assumed it was recently destroyed and there was a timer before it would come back, but it sounds as though there may be an error.
Is there a variable time delay for the Cap Ships to jump in to the point after a player arrives? This may explain it, as I didn't stay in the instance for more than a few minutes before leaving.