I hope that your interpretation is in error , I read it as One FLEET CARRIER per commander not one transportable ship per commander. With the latter interpenetration there would be no point in having the carrier.Seems dodgy there's only 8L, 4M and 4S pads when there's 9 ships in the game that need large pads, 15 medium and 13 (+1 Cobra MkIV) small. How exactly are you supposed to fit your entire "fleet" on it?
If we can only dock one personal ship on board, is that just the one that can refuel it?